Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-associated protein rapa | M5M_RS02055 | Q88NR0 | + | 463497 - 466283 | 103607.0 |
| hypothetical protein | M5M_RS02060 | Not Available | + | 466292 - 466576 | 10387.7 |
| lysophospholipid acyltransferase family protein | M5M_RS02065 | P0ACV2 | + | 466579 - 467526 | 36120.8 |
| dead/deah box helicase | M5M_RS02070 | P57453 | - | 467556 - 469388 | 68343.1 |
| hypothetical protein | M5M_RS02075 | Not Available | + | 469548 - 470366 | 30589.8 |
| hypothetical protein | M5M_RS02080 | Not Available | + | 470579 - 471184 | 23405.6 |
| duf3806 domain-containing protein | M5M_RS02085 | Not Available | - | 471196 - 471699 | 18818.7 |
| nucleoid-associated protein | M5M_RS02090 | Q080H9 | + | 471787 - 472794 | 36808.5 |
| hypothetical protein | M5M_RS02095 | Not Available | + | 472798 - 473157 | 13896.7 |
| daph/dapd/glmu-related protein | M5M_RS02100 | Not Available | - | 473179 - 473799 | 22588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.