Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | M5M_RS02005 | Q9I700 | - | 453819 - 455135 | 47536.9 |
| lysr family transcriptional regulator | M5M_RS02010 | Not Available | + | 455222 - 456178 | 35384.6 |
| hypothetical protein | M5M_RS02015 | Not Available | - | 456378 - 456704 | 12253.4 |
| acyl-coa thioesterase ii | M5M_RS02020 | P0AGG3 | - | 456760 - 457608 | 31615.6 |
| tetr/acrr family transcriptional regulator | M5M_RS02025 | Not Available | + | 457826 - 458461 | 24667.5 |
| duf4823 domain-containing protein | M5M_RS02030 | Not Available | + | 458512 - 459108 | 22296.7 |
| duf1285 domain-containing protein | M5M_RS02035 | Not Available | + | 459110 - 459640 | 20454.3 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | M5M_RS02040 | Q9HZP5 | - | 459693 - 461312 | 58745.6 |
| electron transfer flavoprotein subunit beta/fixa family protein | M5M_RS02045 | Q9HZP6 | + | 461688 - 462437 | 26429.4 |
| fad-binding protein | M5M_RS02050 | Q9HZP7 | + | 462438 - 463367 | 31332.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.