Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bola family transcriptional regulator | M5M_RS01955 | Q56585 | + | 445819 - 446121 | 10961.0 |
| rhodanese-related sulfurtransferase | M5M_RS01960 | Q21L55 | + | 446188 - 447132 | 35503.3 |
| hypothetical protein | M5M_RS19260 | Not Available | + | 447146 - 448426 | 47269.5 |
| hypothetical protein | M5M_RS01970 | Not Available | + | 448611 - 448895 | 9913.79 |
| hypothetical protein | M5M_RS01975 | Not Available | - | 448935 - 449465 | 19997.7 |
| recombination-associated protein rdgc | M5M_RS01980 | Q3II43 | - | 449630 - 450541 | 34186.8 |
| sirb2 family protein | M5M_RS01985 | Not Available | - | 450546 - 450926 | 14048.9 |
| duf4202 domain-containing protein | M5M_RS01990 | Not Available | - | 450923 - 451501 | 21477.7 |
| fumarate/nitrate reduction transcriptional regulator fnr | M5M_RS01995 | O85222 | - | 451510 - 452244 | 26930.4 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | M5M_RS02000 | Q9I702 | - | 452313 - 453803 | 53033.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.