Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | M5M_RS19165 | P50321 | + | 4288634 - 4289638 | 36362.4 |
| pyruvate kinase | M5M_RS19170 | Q8ZNW0 | + | 4289743 - 4291191 | 51732.5 |
| laci family dna-binding transcriptional regulator | M5M_RS19175 | P37947 | + | 4291256 - 4292257 | 36158.6 |
| hypothetical protein | M5M_RS19180 | Not Available | - | 4292264 - 4292605 | 12829.2 |
| abc transporter transmembrane domain-containing protein | M5M_RS21035 | P26760 | + | 4292799 - 4294889 | 73927.8 |
| hlyd family type i secretion periplasmic adaptor subunit | M5M_RS19190 | Q7ANN5 | + | 4294873 - 4296249 | 50933.0 |
| tolc family outer membrane protein | M5M_RS19195 | Q9K2Y1 | + | 4296603 - 4297886 | 47435.4 |
| retention module-containing protein | M5M_RS20545 | Not Available | + | 4297966 - 4300227 | 78182.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.