Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | M5M_RS19070 | C5BMR1 | + | 4264202 - 4265245 | 37212.8 |
| regulatory protein recx | M5M_RS19075 | Q4ZWP2 | + | 4265313 - 4265780 | 17655.0 |
| transposase | M5M_RS19080 | Not Available | - | 4265987 - 4266781 | 30373.4 |
| protein phosphatase 2c domain-containing protein | M5M_RS19085 | Not Available | + | 4267032 - 4267904 | 31787.7 |
| penicillin acylase family protein | M5M_RS19090 | P15558 | - | 4267901 - 4270270 | 87679.8 |
| n-acetylglucosamine-6-phosphate deacetylase | M5M_RS19095 | O32445 | - | 4270391 - 4271545 | 40765.9 |
| sis domain-containing protein | M5M_RS19100 | Q8TZ14 | - | 4271546 - 4272601 | 37143.4 |
| laci family dna-binding transcriptional regulator | M5M_RS19105 | Q7VL44 | - | 4272679 - 4273698 | 36839.8 |
| glucose-6-phosphate isomerase | M5M_RS19110 | Q3JCN1 | + | 4273866 - 4275509 | 59855.7 |
| prolyl oligopeptidase family protein | M5M_RS19115 | P55577 | - | 4275479 - 4277593 | 78468.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.