Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| triacylglycerol lipase | M5M_RS19020 | P15493 | - | 4250814 - 4251803 | 35050.3 |
| low-specificity l-threonine aldolase | M5M_RS19025 | P75823 | + | 4252284 - 4253297 | 36420.6 |
| pepsy domain-containing protein | M5M_RS19030 | Not Available | - | 4253358 - 4254488 | 42809.5 |
| tonb-dependent siderophore receptor | M5M_RS19035 | P16869 | - | 4254564 - 4256684 | 77859.0 |
| fha domain-containing protein | M5M_RS19040 | Not Available | + | 4257025 - 4257387 | 13224.6 |
| serine/threonine-protein kinase | M5M_RS20530 | Not Available | + | 4257447 - 4259822 | 87728.7 |
| fha domain-containing protein | M5M_RS19050 | Not Available | + | 4259870 - 4260223 | 12894.3 |
| ferredoxin fdxa | M5M_RS19055 | P08811 | - | 4260392 - 4260715 | 12025.1 |
| dna mismatch repair protein muts | M5M_RS19060 | Q21LB1 | - | 4260863 - 4263484 | 95722.8 |
| cina family protein | M5M_RS19065 | Q83JZ0 | + | 4263574 - 4264062 | 16306.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.