Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | M5M_RS18870 | O07610 | + | 4220339 - 4221841 | 54361.3 |
| nad-dependent succinate-semialdehyde dehydrogenase | M5M_RS18875 | Q9I6M5 | + | 4221966 - 4223429 | 51721.1 |
| hypothetical protein | M5M_RS18880 | Not Available | + | 4223624 - 4224013 | 14180.1 |
| rho-binding antiterminator | M5M_RS18885 | Not Available | + | 4224091 - 4224339 | 9036.85 |
| xdhc family protein | M5M_RS18890 | O32147 | + | 4224336 - 4225295 | 34259.5 |
| ntp transferase domain-containing protein | M5M_RS18895 | Not Available | + | 4225292 - 4225894 | 21364.7 |
| (2fe-2s)-binding protein | M5M_RS18900 | Q51697 | + | 4225909 - 4226409 | 17169.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | M5M_RS18905 | Q88FX8 | + | 4226409 - 4228613 | 79069.5 |
| transcription elongation factor greb | M5M_RS18910 | Q9HZY5 | - | 4228661 - 4229167 | 19148.7 |
| aldehyde dehydrogenase (nadp(+)) | M5M_RS18915 | Q08IB7 | + | 4229341 - 4230870 | 53235.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.