Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | + | 4211090 - 4211165 | Not Available |
| abc transporter transmembrane domain-containing protein | M5M_RS18830 | Q02IG9 | + | 4211281 - 4212312 | 37173.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | M5M_RS20425 | B3PC19 | + | 4212370 - 4213245 | 31103.7 |
| outer membrane protein assembly factor bamc | M5M_RS18835 | Not Available | + | 4213275 - 4214435 | 43080.9 |
| mbl fold metallo-hydrolase | M5M_RS18840 | Not Available | + | 4214435 - 4215193 | 27406.7 |
| acetyl-coa c-acyltransferase family protein | M5M_RS18845 | Q0KBP1 | + | 4215318 - 4216502 | 41171.8 |
| choice-of-anchor l family pep-cterm protein | M5M_RS18850 | Not Available | + | 4216751 - 4217587 | 28555.3 |
| coa transferase subunit b | M5M_RS18855 | P0C7I8 | - | 4217882 - 4218538 | 23209.3 |
| abc transporter transmembrane domain-containing protein | M5M_RS18860 | Q9ZLE3 | - | 4218550 - 4219250 | 25163.1 |
| lysr family transcriptional regulator | M5M_RS18865 | P52696 | + | 4219426 - 4220328 | 32673.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.