Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | M5M_RS01855 | P32109 | + | 414837 - 419141 | 160761.0 |
| hypothetical protein | M5M_RS01860 | Not Available | - | 419157 - 419636 | 18019.1 |
| transposase | M5M_RS01865 | Not Available | + | 419994 - 420518 | 19499.1 |
| putative ig domain-containing protein | M5M_RS19255 | Not Available | + | 420578 - 428170 | 266125.0 |
| gamma-glutamyltransferase | M5M_RS01875 | P18956 | + | 428290 - 430026 | 60894.9 |
| abc transporter substrate-binding protein | M5M_RS01880 | Not Available | - | 430007 - 430900 | 33598.0 |
| ggdef domain-containing protein | M5M_RS01885 | Not Available | - | 430983 - 432998 | 74632.3 |
| acyl-coa dehydrogenase family protein | M5M_RS01890 | Q50LG2 | - | 433135 - 434304 | 42812.2 |
| biotin carboxylase n-terminal domain-containing protein | M5M_RS01895 | Q96RQ3 | - | 434294 - 436312 | 72877.1 |
| enoyl-coa hydratase/isomerase family protein | M5M_RS01900 | P76082 | - | 436309 - 437124 | 29047.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.