Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf885 family protein | M5M_RS18725 | Not Available | + | 4193885 - 4195717 | 69193.8 |
| hu family dna-binding protein | M5M_RS18730 | Not Available | - | 4196669 - 4197094 | 15050.0 |
| hd domain-containing phosphohydrolase | M5M_RS18735 | Not Available | - | 4197320 - 4198435 | 41653.6 |
| fmdb family zinc ribbon protein | M5M_RS18740 | Not Available | + | 4198595 - 4198864 | 9259.82 |
| aspartate--trna ligase | M5M_RS18745 | C5BPP4 | + | 4198890 - 4200662 | 66343.7 |
| yebc/pmpr family dna-binding transcriptional regulator | M5M_RS18750 | A6VA08 | + | 4200676 - 4201419 | 26478.1 |
| crossover junction endodeoxyribonuclease ruvc | M5M_RS18755 | Q21HN4 | + | 4201479 - 4201994 | 18003.0 |
| holliday junction branch migration protein ruva | M5M_RS18760 | B3PB58 | + | 4202031 - 4202651 | 21711.7 |
| holliday junction branch migration dna helicase ruvb | M5M_RS18765 | Q21HN6 | + | 4202655 - 4203662 | 36989.8 |
| tol-pal system-associated acyl-coa thioesterase | M5M_RS18770 | P44679 | + | 4203655 - 4204080 | 15842.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.