Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | M5M_RS18680 | P0AAP2 | + | 4181862 - 4182815 | 36567.2 |
| class gn sortase | M5M_RS18685 | Not Available | - | 4182818 - 4183375 | 19948.8 |
| marine proteobacterial sortase target protein | M5M_RS18690 | Q14624 | - | 4183368 - 4185512 | 78652.5 |
| proteobacterial dedicated sortase system response regulator | M5M_RS18695 | P50351 | + | 4185713 - 4186405 | 25646.7 |
| atp-binding protein | M5M_RS18700 | P08401 | + | 4186402 - 4188393 | 72804.0 |
| ompa family protein | M5M_RS18705 | Not Available | + | 4188534 - 4189247 | 25288.9 |
| hypothetical protein | M5M_RS20870 | Not Available | + | 4189806 - 4190018 | 7606.15 |
| m1 family metallopeptidase | M5M_RS18710 | Not Available | + | 4189991 - 4192249 | 87742.4 |
| duf6702 family protein | M5M_RS18715 | Not Available | + | 4192309 - 4192737 | 16258.2 |
| fadr/gntr family transcriptional regulator | M5M_RS18720 | P9WMG6 | + | 4193068 - 4193802 | 27141.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.