Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | M5M_RS18530 | Not Available | + | 4148291 - 4148647 | 13136.0 |
| res family nad+ phosphorylase | M5M_RS18535 | Not Available | + | 4148690 - 4149442 | 27717.0 |
| membrane protein | M5M_RS18540 | Not Available | - | 4149483 - 4149839 | 12979.4 |
| yfir/hmsc family protein | M5M_RS18545 | Not Available | - | 4149891 - 4150394 | 18370.5 |
| tonb-dependent siderophore receptor | M5M_RS18550 | Not Available | - | 4150396 - 4152753 | 86860.9 |
| atp-binding protein | M5M_RS18555 | Not Available | + | 4152844 - 4156119 | 121469.0 |
| glycerol kinase glpk | M5M_RS18560 | Q1QVQ3 | - | 4156131 - 4157627 | 54152.4 |
| transaldolase | M5M_RS18565 | B0KHA7 | + | 4157745 - 4158674 | 34018.9 |
| 2-keto-4-pentenoate hydratase | M5M_RS18570 | Not Available | + | 4158700 - 4159476 | 27870.6 |
| carboxynorspermidine decarboxylase | M5M_RS18575 | Q5QCP2 | + | 4159571 - 4160686 | 41116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.