Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | M5M_RS18380 | Not Available | - | 4117208 - 4118509 | 46094.4 |
| enoyl-acp reductase fabv | M5M_RS18385 | Q21HE4 | + | 4118778 - 4119968 | 43126.4 |
| mbl fold metallo-hydrolase | M5M_RS18390 | Not Available | + | 4120040 - 4120942 | 32768.1 |
| nadp(h)-dependent aldo-keto reductase | M5M_RS18395 | P0A9T4 | + | 4120945 - 4121988 | 38548.1 |
| outer membrane beta-barrel protein | M5M_RS18400 | Not Available | + | 4122004 - 4122498 | 17514.0 |
| hypothetical protein | M5M_RS18405 | Not Available | + | 4122529 - 4122924 | 14421.1 |
| glutathione s-transferase family protein | M5M_RS18410 | Q93112 | + | 4122924 - 4123535 | 22556.9 |
| patatin-like phospholipase family protein | M5M_RS18415 | P9WIY8 | - | 4123787 - 4124650 | 31175.8 |
| efflux rnd transporter permease subunit | M5M_RS18420 | Q57124 | - | 4124647 - 4127742 | 113362.0 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS18425 | C9XVZ5 | - | 4127739 - 4128782 | 38026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.