Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS18330 | Not Available | - | 4104063 - 4104911 | 32474.1 |
| lrp/asnc family transcriptional regulator | M5M_RS18335 | Not Available | - | 4104985 - 4105467 | 18446.4 |
| d-2-hydroxyacid dehydrogenase | M5M_RS18340 | O49485 | + | 4105803 - 4106774 | 35371.6 |
| gnat family n-acetyltransferase | M5M_RS18345 | P0AEH3 | - | 4106779 - 4107240 | 17565.0 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | M5M_RS18350 | O52485 | - | 4107504 - 4110662 | 115569.0 |
| lrp/asnc ligand binding domain-containing protein | M5M_RS18355 | P37424 | + | 4110825 - 4111313 | 18351.3 |
| acyl-coa dehydrogenase family protein | M5M_RS18360 | G3KIM8 | + | 4111421 - 4112581 | 41034.5 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS18365 | O02691 | + | 4112594 - 4113370 | 26755.7 |
| bifunctional diguanylate cyclase/phosphodiesterase | M5M_RS19765 | Not Available | - | 4113479 - 4115851 | 89110.8 |
| mfs transporter | M5M_RS18375 | P02980 | - | 4115922 - 4117124 | 43104.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.