Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translesion dna synthesis-associated protein imua | M5M_RS01805 | Not Available | + | 391440 - 392180 | 26782.8 |
| dna polymerase y family protein | M5M_RS01810 | Not Available | + | 392187 - 393671 | 56194.7 |
| error-prone dna polymerase | M5M_RS01815 | C5BNE0 | + | 393675 - 396800 | 116947.0 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS01820 | P55336 | + | 396812 - 397534 | 25575.0 |
| serine aminopeptidase domain-containing protein | M5M_RS19250 | Not Available | + | 397537 - 398223 | 24835.6 |
| queuosine precursor transporter | M5M_RS01830 | Not Available | - | 398592 - 399380 | 29035.1 |
| 6-carboxytetrahydropterin synthase | M5M_RS01835 | Not Available | - | 399377 - 399877 | 18844.3 |
| hypothetical protein | M5M_RS20050 | Not Available | + | 400127 - 400894 | 27823.2 |
| transglutaminase family protein | M5M_RS01845 | Not Available | + | 400857 - 401774 | 34428.1 |
| fibronectin type iii domain-containing protein | M5M_RS01850 | Not Available | + | 401791 - 414801 | 451988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.