Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilt/pilu family type 4a pilus atpase | M5M_RS18230 | Not Available | + | 4078845 - 4080383 | 56474.5 |
| helix-turn-helix transcriptional regulator | M5M_RS18235 | Not Available | - | 4080373 - 4081101 | 28150.4 |
| mfs transporter | M5M_RS18240 | A1JPE9 | + | 4081250 - 4084279 | 110115.0 |
| m4 family metallopeptidase | M5M_RS18245 | Q00971 | + | 4084787 - 4086973 | 77279.3 |
| m20/m25/m40 family metallo-hydrolase | M5M_RS21015 | Q01693 | + | 4087100 - 4088896 | 63029.2 |
| nad(p)/fad-dependent oxidoreductase | M5M_RS18255 | P37631 | + | 4088946 - 4090121 | 42591.9 |
| sdr family oxidoreductase | M5M_RS18260 | Q9Y394 | + | 4090142 - 4090942 | 28727.9 |
| yebc/pmpr family dna-binding transcriptional regulator | M5M_RS18265 | A1U2L4 | + | 4091012 - 4091725 | 26330.1 |
| elongation factor g | M5M_RS18270 | Q21M87 | - | 4091966 - 4094050 | 76691.7 |
| hypothetical protein | M5M_RS18275 | Not Available | + | 4094429 - 4094695 | 9736.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.