Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 16 protein | M5M_RS18030 | P45798 | + | 4037572 - 4039674 | 76119.5 |
| sugar porter family mfs transporter | M5M_RS18035 | P0AGF5 | + | 4039686 - 4041125 | 51609.9 |
| abc transporter transmembrane domain-containing protein | M5M_RS18040 | P21693 | + | 4041360 - 4042737 | 49327.1 |
| hypothetical protein | M5M_RS18045 | Not Available | + | 4042784 - 4043299 | 19154.8 |
| hypothetical protein | M5M_RS18050 | Not Available | - | 4043414 - 4043794 | 13278.2 |
| hypothetical protein | M5M_RS18055 | Not Available | - | 4043740 - 4044237 | 18523.9 |
| winged helix-turn-helix domain-containing protein | M5M_RS18060 | Not Available | - | 4044384 - 4045412 | 38440.0 |
| azlc family abc transporter permease | M5M_RS18065 | O28519 | + | 4045577 - 4046296 | 25573.9 |
| azld domain-containing protein | M5M_RS18070 | Not Available | + | 4046293 - 4046643 | 12542.6 |
| gbsr/marr family transcriptional regulator | M5M_RS18075 | Not Available | + | 4046725 - 4047252 | 20061.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.