Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4348 domain-containing protein | M5M_RS17930 | Not Available | + | 4008722 - 4009156 | 17473.4 |
| barstar family protein | M5M_RS17935 | Not Available | + | 4009243 - 4009566 | 12446.5 |
| hypothetical protein | M5M_RS17940 | Not Available | + | 4009911 - 4010354 | 16242.5 |
| transposase | M5M_RS17945 | Not Available | + | 4010505 - 4010813 | 12136.4 |
| is3 family transposase | M5M_RS17950 | Not Available | + | 4010979 - 4011656 | 25722.1 |
| duf4062 domain-containing protein | M5M_RS17955 | Not Available | + | 4011753 - 4012772 | 38471.8 |
| hypothetical protein | M5M_RS17960 | Not Available | + | 4013285 - 4013647 | 14013.7 |
| polysaccharide deacetylase family protein | M5M_RS17965 | Not Available | + | 4013747 - 4014547 | 29499.9 |
| flagellar brake protein | M5M_RS17970 | Not Available | - | 4014685 - 4015320 | 23100.0 |
| hdod domain-containing protein | M5M_RS17975 | Not Available | - | 4015444 - 4016289 | 31233.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.