Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | M5M_RS17880 | Not Available | - | 4000193 - 4000699 | 19404.4 |
| nad(p)h-quinone oxidoreductase | M5M_RS17885 | Q53FA7 | + | 4000936 - 4001913 | 33910.2 |
| tigr00645 family protein | M5M_RS17890 | Q1IF21 | + | 4001921 - 4002409 | 18344.3 |
| voc family protein | M5M_RS17895 | Not Available | + | 4002409 - 4002777 | 13806.4 |
| caib/baif coa-transferase family protein | M5M_RS17900 | A9WGE3 | + | 4002774 - 4003985 | 42803.3 |
| tetratricopeptide repeat protein | M5M_RS17905 | Not Available | + | 4003982 - 4006108 | 78215.4 |
| hypothetical protein | M5M_RS17910 | Not Available | + | 4006351 - 4006716 | 13407.0 |
| hypothetical protein | M5M_RS17915 | Not Available | + | 4006772 - 4007179 | 15492.5 |
| hypothetical protein | M5M_RS20855 | Not Available | + | 4007253 - 4007639 | 14825.5 |
| gfa family protein | M5M_RS20020 | Not Available | + | 4007702 - 4008124 | 15701.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.