Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycgn family cysteine cluster protein | M5M_RS17830 | A1U123 | + | 3991454 - 3991903 | 17141.1 |
| hypothetical protein | M5M_RS17835 | Not Available | + | 3992157 - 3992525 | 13793.9 |
| sensor histidine kinase | M5M_RS17840 | Not Available | - | 3992593 - 3994173 | 60255.3 |
| response regulator transcription factor | M5M_RS17845 | Not Available | - | 3994170 - 3994961 | 29569.0 |
| hypothetical protein | M5M_RS17850 | Not Available | + | 3995070 - 3996515 | 53462.8 |
| vwa domain-containing protein | M5M_RS17855 | Not Available | + | 3996518 - 3997183 | 24610.5 |
| sodium-dependent bicarbonate transport family permease | M5M_RS17860 | Not Available | + | 3997301 - 3998242 | 33205.9 |
| molybdenum cofactor guanylyltransferase | M5M_RS17865 | B9MA54 | - | 3998226 - 3998858 | 23396.8 |
| pyridoxamine 5'-phosphate oxidase | M5M_RS17870 | Q21IG1 | + | 3998920 - 3999555 | 24016.5 |
| hypothetical protein | M5M_RS17875 | Not Available | - | 3999533 - 4000192 | 23624.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.