Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trm11 family methyltransferase | M5M_RS01755 | Not Available | - | 381419 - 382441 | 37904.3 |
| lysm peptidoglycan-binding domain-containing protein | M5M_RS01760 | P0AEZ8 | - | 382467 - 384050 | 59044.9 |
| hydroxyacylglutathione hydrolase | M5M_RS01765 | Q47FN7 | - | 384167 - 384946 | 27938.2 |
| class i sam-dependent methyltransferase | M5M_RS01770 | P75672 | + | 385019 - 385876 | 32331.4 |
| ribonuclease hi | M5M_RS01775 | Q7WCJ8 | + | 385913 - 386353 | 16292.4 |
| dna polymerase iii subunit epsilon | M5M_RS01780 | P03007 | + | 386359 - 387084 | 26362.5 |
| tigr01621 family pseudouridine synthase | M5M_RS01785 | P43930 | + | 387051 - 387770 | 26059.3 |
| alpha/beta fold hydrolase | M5M_RS01790 | Not Available | + | 387770 - 389320 | 57420.9 |
| hypothetical protein | M5M_RS01795 | Not Available | + | 389362 - 390204 | 30256.9 |
| ggdef domain-containing protein | M5M_RS01800 | Q8EGF8 | - | 390245 - 391174 | 35050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.