Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone groes | M5M_RS17680 | A4VP83 | + | 3961463 - 3961756 | 10367.5 |
| chaperonin groel | M5M_RS17685 | C5BP08 | + | 3961809 - 3963449 | 56904.5 |
| abc transporter transmembrane domain-containing protein | M5M_RS17690 | B3PLM6 | + | 3963507 - 3964280 | 27647.4 |
| nrtr dna-binding winged helix domain-containing protein | M5M_RS17695 | Not Available | - | 3964395 - 3965090 | 26212.7 |
| hypothetical protein | M5M_RS17700 | Not Available | + | 3965210 - 3965905 | 24642.7 |
| succinylglutamate desuccinylase/aspartoacylase family protein | M5M_RS20850 | Not Available | + | 3965973 - 3967655 | 60135.7 |
| alkaline phosphatase | M5M_RS17710 | P15693 | + | 3967648 - 3969117 | 52349.1 |
| ggdef domain-containing protein | M5M_RS17715 | Q9A5I5 | - | 3969157 - 3969819 | 24667.5 |
| hypothetical protein | M5M_RS17720 | Not Available | + | 3969992 - 3970573 | 21370.7 |
| hypothetical protein | M5M_RS17725 | Not Available | + | 3970922 - 3973375 | 88107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.