Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnase adapter rapz | M5M_RS17230 | A5VZ39 | - | 3868966 - 3869841 | 32862.8 |
| pts iia-like nitrogen regulatory protein ptsn | M5M_RS17235 | Q9HVV4 | - | 3869850 - 3870317 | 16947.5 |
| ribosome hibernation-promoting factor, hpf/yfia family | M5M_RS17240 | P17160 | - | 3870356 - 3870646 | 11026.2 |
| abc transporter transmembrane domain-containing protein | M5M_RS17245 | P0A171 | - | 3870700 - 3872192 | 54454.2 |
| lps export abc transporter atp-binding protein | M5M_RS17250 | P0A9V3 | - | 3872324 - 3873049 | 26588.4 |
| lipopolysaccharide transport periplasmic protein lpta | M5M_RS17255 | P0ADV3 | - | 3873051 - 3873569 | 18805.3 |
| lps export abc transporter periplasmic protein lptc | M5M_RS17260 | Not Available | - | 3873556 - 3874143 | 21863.0 |
| had family hydrolase | M5M_RS17265 | Q8ZB47 | - | 3874146 - 3874673 | 19439.5 |
| kpsf/gutq family sugar-phosphate isomerase | M5M_RS17270 | Q9HVW0 | - | 3874688 - 3875662 | 34314.6 |
| phospholipid-binding protein mlac | M5M_RS17275 | Q9Z3Z9 | + | 3875852 - 3876475 | 22605.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.