Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | M5M_RS17030 | Q0ZAH6 | + | 3817505 - 3819445 | 70249.4 |
| na+/h+ antiporter nhaa | M5M_RS17035 | A6Q6G8 | + | 3819559 - 3820887 | 47656.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | M5M_RS17040 | O69689 | - | 3820975 - 3822255 | 45661.8 |
| tetr/acrr family transcriptional regulator | M5M_RS17045 | Not Available | - | 3822506 - 3823177 | 25194.8 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS17050 | Not Available | + | 3823392 - 3824558 | 41967.5 |
| efflux rnd transporter permease subunit | M5M_RS17055 | Q8FWV9 | + | 3824561 - 3827653 | 111012.0 |
| duf962 domain-containing protein | M5M_RS17060 | Not Available | + | 3827680 - 3827982 | 11666.3 |
| transporter substrate-binding domain-containing protein | M5M_RS19735 | Not Available | - | 3828041 - 3828871 | 31018.1 |
| abc transporter substrate-binding protein | M5M_RS17070 | Not Available | - | 3828871 - 3829671 | 29724.4 |
| gnat family n-acetyltransferase | M5M_RS17075 | Not Available | + | 3829812 - 3830303 | 17901.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.