Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | M5M_RS16930 | Not Available | + | 3797904 - 3798683 | 29863.3 |
| dass family sodium-coupled anion symporter | M5M_RS16935 | Q49YW0 | + | 3798804 - 3800180 | 48076.3 |
| gfa family protein | M5M_RS16940 | Q9CXS4 | - | 3800185 - 3800577 | 14562.4 |
| class i sam-dependent methyltransferase | M5M_RS16945 | Not Available | + | 3800603 - 3801388 | 28476.0 |
| trypsin-like peptidase domain-containing protein | M5M_RS21010 | P73354 | + | 3801811 - 3803379 | 57913.3 |
| dna polymerase iii subunit delta | M5M_RS16955 | P28630 | - | 3803474 - 3804523 | 37969.7 |
| lps assembly lipoprotein lpte | M5M_RS16960 | Not Available | - | 3804504 - 3805016 | 18435.0 |
| leucine--trna ligase | M5M_RS16965 | Q21FG6 | - | 3805033 - 3807480 | 91909.3 |
| zinc ribbon-containing protein | M5M_RS19725 | Not Available | + | 3807605 - 3808045 | 15712.6 |
| ggdef domain-containing protein | M5M_RS19730 | Q55434 | + | 3808086 - 3809006 | 33480.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.