Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-deoxynucleotidase | M5M_RS16780 | Q7MMF9 | + | 3767272 - 3767865 | 22186.7 |
| hypothetical protein | M5M_RS16785 | Not Available | + | 3767934 - 3768419 | 18306.5 |
| alpha/beta fold hydrolase | M5M_RS16790 | Not Available | + | 3768436 - 3769155 | 26526.1 |
| hypothetical protein | M5M_RS16795 | Not Available | - | 3769171 - 3769659 | 19256.9 |
| biopolymer transporter exbd | M5M_RS16800 | Not Available | + | 3769770 - 3770183 | 15170.2 |
| sodium-dependent transporter | M5M_RS16805 | O07577 | - | 3770245 - 3771594 | 47994.7 |
| ssra-binding protein smpb | M5M_RS16810 | C5BQH7 | - | 3771697 - 3772176 | 18319.1 |
| sodium-dependent transporter | M5M_RS16815 | Not Available | - | 3772246 - 3773679 | 51273.7 |
| type ii toxin-antitoxin system rata family toxin | M5M_RS16820 | A5F376 | + | 3773874 - 3774308 | 16104.6 |
| rnfh family protein | M5M_RS16825 | Q2SMN3 | + | 3774313 - 3774630 | 11705.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.