Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2200 domain-containing protein | M5M_RS16580 | Not Available | + | 3710855 - 3711208 | 13453.3 |
| carbohydrate-binding protein | M5M_RS16585 | Q9RGX8 | - | 3711254 - 3713029 | 63732.2 |
| alkaline phosphatase d family protein | M5M_RS16590 | Not Available | - | 3713236 - 3715569 | 86610.5 |
| sugar kinase | M5M_RS16595 | Q15UF1 | - | 3715572 - 3716483 | 32898.1 |
| tonb-dependent receptor | M5M_RS16600 | Not Available | + | 3716913 - 3720377 | 127303.0 |
| hypothetical protein | M5M_RS21005 | P13734 | - | 3721024 - 3723213 | 80173.4 |
| aldehyde dehydrogenase | M5M_RS16610 | O34660 | + | 3723468 - 3724949 | 52555.6 |
| phosphotransferase family protein | M5M_RS16615 | Not Available | + | 3724861 - 3725970 | 40971.8 |
| phosphopyruvate hydratase | M5M_RS16620 | Q24YW4 | + | 3725957 - 3727243 | 47234.1 |
| polysaccharide deacetylase family protein | M5M_RS16625 | Q81AF4 | + | 3727408 - 3728115 | 26518.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.