Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase-fold protein | M5M_RS16325 | Not Available | - | 3637455 - 3638390 | 35614.1 |
| fggy-family carbohydrate kinase | M5M_RS16330 | Not Available | - | 3638387 - 3639805 | 52487.7 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | M5M_RS16335 | P40747 | + | 3640077 - 3642176 | 76019.6 |
| l-rhamnose catabolism isomerase | M5M_RS16340 | Q92S14 | + | 3642189 - 3643484 | 48117.4 |
| glycoside hydrolase family 43 protein | M5M_RS16345 | Not Available | + | 3643866 - 3644801 | 34575.1 |
| ig-like domain-containing protein | M5M_RS16350 | Not Available | + | 3644932 - 3648639 | 132001.0 |
| arac family transcriptional regulator | M5M_RS16355 | Not Available | - | 3648684 - 3649511 | 31338.7 |
| phytanoyl-coa dioxygenase family protein | M5M_RS16360 | Not Available | + | 3649624 - 3650502 | 33135.9 |
| deor/glpr family dna-binding transcription regulator | M5M_RS16365 | A7ZV62 | + | 3650588 - 3651394 | 29637.8 |
| sapc family protein | M5M_RS16370 | Not Available | + | 3651617 - 3652330 | 25757.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.