Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter family protein | M5M_RS01605 | P31640 | - | 346119 - 347825 | 60825.6 |
| duf4212 domain-containing protein | M5M_RS01610 | Not Available | - | 347836 - 348102 | 10447.0 |
| dcap family trimeric outer membrane transporter | M5M_RS01615 | Not Available | - | 348203 - 349477 | 45619.2 |
| response regulator transcription factor | M5M_RS01620 | Not Available | + | 349691 - 350332 | 23196.0 |
| pas-domain containing protein | M5M_RS01625 | P42245 | - | 350340 - 353852 | 129397.0 |
| paai family thioesterase | M5M_RS01630 | Not Available | + | 353997 - 354500 | 17710.4 |
| paai family thioesterase | M5M_RS01635 | Not Available | + | 354497 - 354937 | 15889.4 |
| molecular chaperone htpg | M5M_RS01640 | Q21IX0 | + | 355044 - 356966 | 72649.6 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | M5M_RS01645 | B3PHG2 | + | 357104 - 358162 | 37288.1 |
| duf4389 domain-containing protein | M5M_RS01650 | Not Available | + | 358159 - 358473 | 11698.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.