Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | M5M_RS16275 | A9BNB6 | + | 3624043 - 3624780 | 26199.3 |
| abc transporter substrate-binding protein | M5M_RS16280 | Not Available | + | 3624901 - 3625656 | 28268.9 |
| alpha/beta fold hydrolase | M5M_RS19715 | A1AUS2 | - | 3625697 - 3626704 | 36655.0 |
| beta-l-arabinofuranosidase domain-containing protein | M5M_RS16290 | Not Available | - | 3626834 - 3628528 | 63493.1 |
| mfs transporter | M5M_RS16295 | P74168 | - | 3628551 - 3630029 | 53997.0 |
| sugar mfs transporter | M5M_RS16300 | Not Available | - | 3630116 - 3631516 | 50754.6 |
| rok family protein | M5M_RS16305 | P54495 | - | 3631553 - 3632584 | 35512.7 |
| hypothetical protein | M5M_RS16310 | Not Available | - | 3632697 - 3634274 | 58485.4 |
| glycoside hydrolase family 125 protein | M5M_RS16315 | Q10449 | - | 3634360 - 3635784 | 53803.8 |
| glucose-6-phosphate isomerase | M5M_RS16320 | Not Available | - | 3635814 - 3637448 | 59963.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.