Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS20260 | Not Available | + | 3589822 - 3591072 | 44798.1 |
| abc transporter substrate-binding protein | M5M_RS16190 | Not Available | + | 3591220 - 3591942 | 26641.6 |
| carboxypeptidase-like regulatory domain-containing protein | M5M_RS16195 | Not Available | + | 3592128 - 3592607 | 17618.7 |
| lipase family protein | M5M_RS16200 | Not Available | + | 3592641 - 3593810 | 42987.1 |
| Tmrna,resume consensus sequence (at 88): attagttgccaacgatga | Not Available | Not Available | + | 3594315 - 3594702 | Not Available |
| arac family transcriptional regulator | M5M_RS16205 | Not Available | + | 3595436 - 3596566 | 43743.6 |
| sulfatase | M5M_RS16210 | Q89YS5 | - | 3596576 - 3598222 | 62767.8 |
| fibronectin type iii domain-containing protein | M5M_RS16215 | Not Available | + | 3598520 - 3602806 | 152821.0 |
| sugar mfs transporter | M5M_RS16220 | Q2YIJ8 | + | 3603111 - 3604355 | 43724.1 |
| carbohydrate kinase | M5M_RS16225 | A2YQL4 | + | 3604364 - 3605317 | 34307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.