Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase iii c-terminal domain-containing protein | M5M_RS16135 | A1K5Y5 | - | 3574658 - 3575662 | 35335.7 |
| aminopeptidase n | M5M_RS16140 | Q11010 | - | 3575930 - 3578557 | 97933.3 |
| arac family transcriptional regulator | M5M_RS16145 | Not Available | + | 3578679 - 3579716 | 39907.4 |
| acyl-coa carboxylase subunit beta | M5M_RS16150 | Q57079 | + | 3580080 - 3581771 | 60958.9 |
| biotin/lipoyl-containing protein | M5M_RS16155 | Q06862 | + | 3581798 - 3584629 | 103962.0 |
| methylmalonyl-coa epimerase | M5M_RS16160 | Q3IZP4 | + | 3584650 - 3585066 | 15152.1 |
| methylmalonyl-coa mutase | M5M_RS16165 | Q3J4D7 | + | 3585198 - 3587339 | 78096.9 |
| methylmalonyl co-a mutase-associated gtpase meab | M5M_RS16170 | P27254 | + | 3587363 - 3588316 | 34850.3 |
| thioesterase domain-containing protein | M5M_RS16175 | Not Available | + | 3588349 - 3588810 | 16530.8 |
| hypothetical protein | M5M_RS16180 | Not Available | + | 3588955 - 3589812 | 31914.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.