Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS16080 | Not Available | - | 3565640 - 3566005 | 12926.7 |
| rna polymerase sigma factor | M5M_RS16085 | Q45585 | - | 3565998 - 3566543 | 20027.6 |
| duf6249 domain-containing protein | M5M_RS16090 | Not Available | - | 3566536 - 3566901 | 12861.3 |
| hypothetical protein | M5M_RS16095 | Not Available | - | 3566975 - 3567601 | 22352.2 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | M5M_RS16100 | Q1LJ80 | - | 3567602 - 3568168 | 20591.5 |
| rieske 2fe-2s domain-containing protein | M5M_RS16105 | Q9XJ38 | - | 3568186 - 3569211 | 38728.5 |
| gnat family n-acetyltransferase | M5M_RS20255 | Not Available | - | 3569208 - 3571478 | 85999.6 |
| f390 synthetase-related protein | M5M_RS16120 | Not Available | - | 3571462 - 3572820 | 51424.9 |
| mbl fold metallo-hydrolase | M5M_RS16125 | Not Available | - | 3572821 - 3573663 | 31149.5 |
| nad(p)-dependent oxidoreductase | M5M_RS16130 | Q8PDW5 | - | 3573660 - 3574658 | 37007.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.