Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS15930 | Not Available | + | 3533621 - 3533977 | 12724.2 |
| tonb-dependent receptor | M5M_RS15935 | Not Available | - | 3534128 - 3536362 | 80348.3 |
| arac family transcriptional regulator | M5M_RS15940 | Not Available | + | 3536613 - 3537635 | 38122.5 |
| hydroxymethylglutaryl-coa reductase | M5M_RS15945 | Q58116 | + | 3537736 - 3538908 | 41622.4 |
| mfs transporter | M5M_RS15950 | A0QYL8 | + | 3538934 - 3540232 | 45682.9 |
| amp-binding protein | M5M_RS15955 | B2HGV4 | + | 3540229 - 3541851 | 59638.8 |
| thioesterase family protein | M5M_RS15960 | Not Available | - | 3542039 - 3542470 | 16047.9 |
| iron-containing alcohol dehydrogenase | M5M_RS15965 | A4IP64 | - | 3542478 - 3543638 | 40038.5 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | M5M_RS15970 | Q5LLW7 | - | 3543642 - 3545402 | 64081.9 |
| lysr family transcriptional regulator | M5M_RS15975 | Q9EXL7 | + | 3545496 - 3546401 | 33674.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.