Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ricin-type beta-trefoil lectin domain protein | M5M_RS15830 | Not Available | - | 3514137 - 3516047 | 68729.2 |
| duf885 family protein | M5M_RS15835 | Not Available | - | 3516193 - 3517944 | 65747.5 |
| acyltransferase | M5M_RS15840 | Not Available | + | 3518093 - 3519130 | 39406.7 |
| dinb family protein | M5M_RS15845 | Not Available | - | 3519103 - 3519636 | 20108.8 |
| heme abc transporter atp-binding protein | M5M_RS15850 | Q12R52 | - | 3519718 - 3520488 | 27594.3 |
| iron abc transporter permease | M5M_RS15855 | Q56992 | - | 3520488 - 3521510 | 35517.4 |
| hemin abc transporter substrate-binding protein | M5M_RS15860 | Not Available | - | 3521510 - 3522355 | 29597.0 |
| biopolymer transporter exbd | M5M_RS15865 | Not Available | - | 3522360 - 3522800 | 15978.4 |
| mota/tolq/exbb proton channel family protein | M5M_RS15870 | O52043 | - | 3522797 - 3523375 | 20357.8 |
| energy transducer tonb | M5M_RS15875 | Not Available | - | 3523384 - 3524082 | 24475.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.