Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf748 domain-containing protein | M5M_RS01555 | Not Available | - | 333483 - 336293 | 102225.0 |
| atp-dependent zinc protease | M5M_RS01560 | Not Available | + | 336483 - 337022 | 20329.7 |
| glycerol-3-phosphate dehydrogenase/oxidase | M5M_RS01565 | P53435 | + | 337060 - 338646 | 57801.7 |
| spermidine synthase | M5M_RS19245 | Not Available | - | 338631 - 339434 | 30492.8 |
| m28 family metallopeptidase | M5M_RS01575 | Not Available | + | 339593 - 341305 | 61970.3 |
| tsup family transporter | M5M_RS01580 | P0AD32 | + | 341358 - 342116 | 26407.1 |
| hypothetical protein | M5M_RS01585 | Not Available | + | 342123 - 342584 | 17540.3 |
| exonuclease domain-containing protein | M5M_RS01590 | Not Available | - | 342612 - 343295 | 25096.9 |
| putative nucleotidyltransferase substrate binding domain-containing protein | M5M_RS01595 | Not Available | - | 343292 - 345157 | 69224.9 |
| duf1223 domain-containing protein | M5M_RS01600 | Not Available | - | 345236 - 345949 | 26301.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.