Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | M5M_RS15780 | Q6W3F0 | + | 3498635 - 3499447 | 30394.1 |
| duf4340 domain-containing protein | M5M_RS15785 | Not Available | - | 3499521 - 3500414 | 32598.1 |
| gldg family protein | M5M_RS15790 | Not Available | - | 3500407 - 3503289 | 106189.0 |
| abc transporter atp-binding protein | M5M_RS15795 | C0SPB4 | - | 3503279 - 3504238 | 35176.2 |
| exem/nuch family extracellular endonuclease | M5M_RS15800 | Not Available | + | 3504706 - 3507516 | 99372.3 |
| hypothetical protein | M5M_RS15805 | Not Available | + | 3507587 - 3507982 | 13637.5 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS15810 | Q8XEH9 | + | 3508062 - 3509510 | 52709.1 |
| efflux rnd transporter permease subunit | M5M_RS15815 | P38054 | + | 3509523 - 3512627 | 112651.0 |
| heparan-alpha-glucosaminide n-acetyltransferase | M5M_RS15820 | Not Available | + | 3512631 - 3513329 | 27221.0 |
| yoak family protein | M5M_RS15825 | Not Available | + | 3513367 - 3514038 | 23762.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.