Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS15730 | Not Available | - | 3489661 - 3489984 | 12050.2 |
| outer membrane beta-barrel protein | M5M_RS15735 | Not Available | + | 3490184 - 3490804 | 21659.6 |
| hypothetical protein | M5M_RS15740 | Not Available | - | 3490918 - 3492162 | 46006.8 |
| abc transporter atp-binding protein | M5M_RS15745 | Q2IF17 | - | 3492159 - 3492860 | 25304.7 |
| abc transporter permease | M5M_RS15750 | Not Available | - | 3492871 - 3494103 | 44604.5 |
| abc transporter permease | M5M_RS15755 | Q87EF5 | - | 3494100 - 3495335 | 45004.5 |
| outer membrane lipoprotein-sorting protein | M5M_RS15760 | Not Available | - | 3495332 - 3496087 | 28435.2 |
| hypothetical protein | M5M_RS15765 | Not Available | - | 3496314 - 3496604 | 10359.5 |
| hypothetical protein | M5M_RS15770 | Not Available | + | 3496855 - 3497382 | 18898.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | M5M_RS15775 | Q87Q87 | + | 3497444 - 3498547 | 40697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.