Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | M5M_RS15575 | A1B8Z2 | + | 3455145 - 3456095 | 33368.2 |
| aconitase x swivel domain-containing protein | M5M_RS15580 | Not Available | - | 3456143 - 3456583 | 15400.8 |
| aconitase x | M5M_RS15585 | Q58709 | - | 3456584 - 3457753 | 42229.1 |
| hypothetical protein | M5M_RS15590 | Not Available | + | 3457842 - 3458240 | 14977.7 |
| yaii/yqxd family protein | M5M_RS15595 | A1SBK3 | + | 3458240 - 3458692 | 16739.0 |
| stas/sec14 domain-containing protein | M5M_RS15600 | Not Available | + | 3458737 - 3459093 | 13256.0 |
| duf1287 domain-containing protein | M5M_RS15605 | P32668 | + | 3459090 - 3459671 | 21702.0 |
| hypothetical protein | M5M_RS15610 | Not Available | + | 3459737 - 3459940 | 8010.3 |
| phosphotransferase | M5M_RS15615 | Not Available | - | 3459941 - 3460804 | 32961.2 |
| nicotinamide riboside transporter pnuc | M5M_RS15620 | P24520 | - | 3460806 - 3461429 | 23857.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.