Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ysc84-related protein | M5M_RS15525 | Not Available | + | 3442721 - 3443281 | 19312.7 |
| hybrid sensor histidine kinase/response regulator | M5M_RS19705 | Q52969 | - | 3443289 - 3445037 | 64201.9 |
| abc transporter substrate-binding protein | M5M_RS15535 | Not Available | - | 3445090 - 3445863 | 28371.5 |
| protein kinase domain-containing protein | M5M_RS15540 | Not Available | - | 3445860 - 3447689 | 68845.1 |
| duf6962 family protein | M5M_RS15545 | Not Available | + | 3447813 - 3448433 | 22401.0 |
| duf6482 family protein | M5M_RS15550 | Not Available | - | 3448416 - 3448706 | 10491.5 |
| mfs transporter | M5M_RS15555 | Q0K843 | - | 3448762 - 3449997 | 44795.1 |
| aspartate aminotransferase family protein | M5M_RS15560 | Q9C509 | - | 3450006 - 3451454 | 52473.1 |
| alanine racemase | M5M_RS15565 | Not Available | + | 3451567 - 3452736 | 43213.6 |
| penicillin acylase family protein | M5M_RS15570 | Not Available | + | 3452737 - 3455148 | 88409.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.