Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing sensor histidine kinase | M5M_RS15475 | Q8DMT2 | + | 3426309 - 3427502 | 43893.8 |
| atp-binding protein | M5M_RS15480 | P0AFA3 | - | 3427480 - 3429309 | 69224.7 |
| nitrate reductase subunit alpha | M5M_RS15485 | P09152 | + | 3429553 - 3433341 | 142369.0 |
| nitrate reductase subunit beta | M5M_RS15490 | P11349 | + | 3433341 - 3434882 | 58277.7 |
| nitrate reductase molybdenum cofactor assembly chaperone | M5M_RS15495 | P0AF27 | + | 3434879 - 3435613 | 27769.8 |
| respiratory nitrate reductase subunit gamma | M5M_RS15500 | P11350 | + | 3435616 - 3436290 | 25233.5 |
| peptidylprolyl isomerase | M5M_RS15505 | Not Available | + | 3436418 - 3437179 | 27792.9 |
| carbonate dehydratase | M5M_RS15510 | P61517 | + | 3437205 - 3437849 | 24378.2 |
| hypothetical protein | M5M_RS15515 | Not Available | + | 3437982 - 3438668 | 26179.3 |
| eal domain-containing protein | M5M_RS19700 | Not Available | - | 3438690 - 3442583 | 144881.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.