Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS15375 | Not Available | - | 3403056 - 3403547 | 18071.7 |
| dnaj domain-containing protein | M5M_RS19690 | Not Available | - | 3403885 - 3404202 | 12105.5 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS15385 | Not Available | - | 3404314 - 3405399 | 38943.6 |
| efflux rnd transporter permease subunit | M5M_RS15390 | Not Available | - | 3405392 - 3408706 | 119788.0 |
| duf2892 domain-containing protein | M5M_RS15395 | Not Available | + | 3408847 - 3409035 | 6846.62 |
| rhodanese-like domain-containing protein | M5M_RS15400 | Not Available | + | 3409327 - 3409674 | 11911.5 |
| ggdef domain-containing response regulator | M5M_RS15405 | Q9ABX9 | - | 3409712 - 3411370 | 62121.6 |
| response regulator | M5M_RS15410 | Not Available | - | 3411375 - 3411800 | 15993.3 |
| atp-binding protein | M5M_RS19695 | Q9R6X3 | - | 3411790 - 3414267 | 91958.8 |
| hypothetical protein | M5M_RS15420 | Not Available | - | 3414425 - 3414841 | 15814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.