Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2784 domain-containing protein | M5M_RS01505 | Not Available | + | 322019 - 322303 | 10649.5 |
| helix-turn-helix domain-containing protein | M5M_RS01510 | Not Available | + | 322664 - 323026 | 13430.3 |
| type ii toxin-antitoxin system hipa family toxin | M5M_RS01515 | Not Available | + | 323020 - 324333 | 48078.4 |
| duf1996 domain-containing protein | M5M_RS01520 | Not Available | + | 324914 - 326191 | 46204.3 |
| abc transporter substrate-binding protein | M5M_RS01525 | Not Available | - | 326225 - 326995 | 28457.0 |
| histidine utilization repressor | M5M_RS01530 | Q9HU78 | + | 327385 - 328101 | 26029.9 |
| urocanate hydratase | M5M_RS01535 | Q7P190 | + | 328168 - 329841 | 60419.2 |
| histidine ammonia-lyase | M5M_RS01540 | Q9KSQ4 | + | 329904 - 331427 | 54557.9 |
| serine hydrolase | M5M_RS01545 | P07062 | + | 331536 - 332873 | 48002.5 |
| hypothetical protein | M5M_RS01550 | Not Available | + | 332883 - 333173 | 11213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.