Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | M5M_RS15225 | Q21MT0 | + | 3368781 - 3369578 | 29686.3 |
| co2+/mg2+ efflux protein apag | M5M_RS15230 | Q5P714 | + | 3369575 - 3369952 | 13812.6 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | M5M_RS15235 | B3PKV6 | + | 3369952 - 3370770 | 30154.4 |
| udp-glucose 4-epimerase gale | M5M_RS15240 | Q553X7 | - | 3371017 - 3372030 | 36311.2 |
| prka family serine protein kinase | M5M_RS15245 | P0ACY5 | + | 3372342 - 3374264 | 73594.4 |
| yeah/yhbh family protein | M5M_RS15250 | A4VHH5 | + | 3374280 - 3375563 | 48717.7 |
| spovr family protein | M5M_RS15255 | P29013 | + | 3375553 - 3377073 | 59536.5 |
| hypothetical protein | M5M_RS15260 | Not Available | - | 3377090 - 3377359 | 9430.01 |
| response regulator | M5M_RS15265 | E1WA34 | - | 3377356 - 3377967 | 22388.1 |
| sensor histidine kinase | M5M_RS15270 | P14377 | + | 3378502 - 3379809 | 47605.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.