Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | M5M_RS14975 | Not Available | + | 3316122 - 3317045 | 35877.8 |
| voc family protein | M5M_RS14980 | Not Available | + | 3317357 - 3317749 | 13943.4 |
| hypothetical protein | M5M_RS14985 | Not Available | + | 3317939 - 3319471 | 56053.1 |
| hypothetical protein | M5M_RS14990 | Not Available | + | 3319474 - 3319887 | 15322.4 |
| hypothetical protein | M5M_RS14995 | Not Available | + | 3319890 - 3320330 | 16574.7 |
| phospholipase d-like domain-containing protein | M5M_RS15000 | A8IW99 | + | 3320677 - 3321375 | 26320.9 |
| peroxiredoxin-like family protein | M5M_RS15005 | Not Available | + | 3321450 - 3322124 | 24236.1 |
| hypothetical protein | M5M_RS15010 | Not Available | - | 3322192 - 3322404 | 7807.9 |
| cupin domain-containing protein | M5M_RS15015 | Not Available | + | 3322594 - 3323070 | 17494.9 |
| m14 family metallocarboxypeptidase | M5M_RS15020 | Not Available | - | 3323112 - 3324068 | 34832.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.