Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | M5M_RS14875 | O86034 | - | 3293119 - 3293901 | 27410.2 |
| abc transporter atp-binding protein | M5M_RS14880 | P39459 | - | 3294030 - 3294908 | 32537.2 |
| abc transporter permease | M5M_RS14885 | Q55461 | - | 3294919 - 3295914 | 36211.5 |
| cmpa/nrta family abc transporter substrate-binding protein | M5M_RS14890 | P73450 | - | 3296014 - 3297363 | 50082.7 |
| alginate export family protein | M5M_RS14895 | Not Available | - | 3297827 - 3299002 | 41837.3 |
| nnrs family protein | M5M_RS14900 | Not Available | - | 3299408 - 3300601 | 43641.2 |
| nitrate/nitrite transporter | M5M_RS14905 | Q9RA46 | - | 3300601 - 3301890 | 47514.5 |
| nark family nitrate/nitrite mfs transporter | M5M_RS14910 | Not Available | + | 3302203 - 3303678 | 53793.6 |
| bifunctional protein-serine/threonine kinase/phosphatase | M5M_RS14915 | Q97PA9 | + | 3303732 - 3305471 | 64104.1 |
| type iv pili methyl-accepting chemotaxis transducer n-terminal domain-containing protein | M5M_RS14920 | Not Available | + | 3305568 - 3306338 | 28260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.