Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide reductase subunit alpha | M5M_RS14825 | Not Available | - | 3281988 - 3282677 | 25294.3 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | M5M_RS14830 | Q9HI70 | - | 3282680 - 3284827 | 80409.0 |
| molybdenum cofactor biosynthesis protein b | M5M_RS14835 | Not Available | - | 3285024 - 3285569 | 19573.2 |
| gtp 3',8-cyclase moaa | M5M_RS14840 | A0KIL8 | - | 3285608 - 3286600 | 36580.1 |
| thiolase c-terminal domain-containing protein | M5M_RS14845 | O26884 | + | 3287085 - 3288257 | 40886.0 |
| acetoacetyl-coa reductase | M5M_RS14850 | P50205 | + | 3288307 - 3289050 | 26611.8 |
| polyhydroxyalkanoate depolymerase | M5M_RS14855 | Not Available | - | 3289097 - 3290308 | 46158.2 |
| phasin family protein | M5M_RS14860 | Not Available | - | 3290373 - 3290726 | 12891.2 |
| polyhydroxyalkanoate synthesis repressor phar | M5M_RS14865 | P45373 | - | 3290866 - 3291306 | 16850.2 |
| alpha/beta hydrolase | M5M_RS14870 | O66392 | - | 3291373 - 3293100 | 64640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.