Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | M5M_RS01460 | Q87YF7 | + | 313379 - 314140 | 27403.9 |
| low molecular weight protein-tyrosine-phosphatase | M5M_RS01465 | P53433 | + | 314137 - 314610 | 16977.1 |
| udp-n-acetylmuramate dehydrogenase | M5M_RS01470 | Q9HZM7 | + | 314616 - 315659 | 37221.7 |
| alpha-ketoglutarate-dependent dioxygenase alkb | M5M_RS01475 | Q58DM4 | + | 315625 - 316230 | 22416.8 |
| abc transporter transmembrane domain-containing protein | M5M_RS01480 | Not Available | + | 316460 - 317103 | 22572.2 |
| excinuclease abc subunit uvrc | M5M_RS01485 | Q21J16 | + | 317185 - 319011 | 67515.7 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | M5M_RS01490 | P45419 | + | 319046 - 319606 | 20499.7 |
| Trna-cys | Not Available | Not Available | + | 319739 - 319812 | Not Available |
| Trna-leu | Not Available | Not Available | + | 319870 - 319956 | Not Available |
| hypothetical protein | M5M_RS20045 | Not Available | + | 320878 - 321606 | 25410.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.