Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | M5M_RS14475 | C1DHQ5 | + | 3203198 - 3204298 | 39245.7 |
| spor domain-containing protein | M5M_RS14480 | Not Available | + | 3204339 - 3205841 | 53978.8 |
| glutamate synthase large subunit | M5M_RS14485 | E1V8I1 | + | 3206219 - 3210667 | 161881.0 |
| fad-dependent oxidoreductase | M5M_RS14490 | E1V8I0 | + | 3210686 - 3212104 | 52300.3 |
| uroporphyrinogen decarboxylase | M5M_RS14495 | B3PDU1 | + | 3212387 - 3213451 | 38730.6 |
| hd-gyp domain-containing protein | M5M_RS14500 | Not Available | + | 3213692 - 3215056 | 50975.2 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | M5M_RS14505 | A1TXM4 | - | 3215109 - 3215732 | 23039.6 |
| nad(p)/fad-dependent oxidoreductase | M5M_RS14510 | Q05627 | + | 3215886 - 3217514 | 58847.2 |
| rna methyltransferase | M5M_RS14515 | P74261 | + | 3217525 - 3218247 | 26342.8 |
| hypothetical protein | M5M_RS14520 | Not Available | + | 3218276 - 3218491 | 7804.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.