Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m9 family metallopeptidase | M5M_RS19675 | P43154 | + | 3189830 - 3192637 | 101113.0 |
| thermonuclease family protein | M5M_RS14430 | Not Available | + | 3192871 - 3193551 | 25057.8 |
| malic enzyme-like nad(p)-binding protein | M5M_RS14435 | E1V8J1 | + | 3193702 - 3194970 | 44816.8 |
| penicillin-binding protein 1a | M5M_RS14440 | Q07806 | - | 3195007 - 3197526 | 93585.3 |
| pilus assembly protein pilm | M5M_RS14445 | G3XD28 | + | 3197672 - 3198742 | 38566.1 |
| piln domain-containing protein | M5M_RS14450 | G3XD30 | + | 3198742 - 3199311 | 21696.0 |
| type 4a pilus biogenesis protein pilo | M5M_RS14455 | G3XD51 | + | 3199311 - 3199925 | 22688.2 |
| pilus assembly protein pilp | M5M_RS14460 | G3XCX7 | + | 3199928 - 3200452 | 19313.2 |
| type iv pilus secretin pilq | M5M_RS14465 | P34750 | + | 3200458 - 3202629 | 79104.3 |
| shikimate kinase | M5M_RS14470 | Q87V14 | + | 3202626 - 3203138 | 19056.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.